OverExpress Bibliography

Abergel C, Coutard B, Byrne D, Chenivesse S, Claude JB, Deregnaucourt C, et al. Structural genomics of highly conserved microbial genes of unknown function in search of new antibacterial targets. J Struct Funct Genomics. 2003;4(2-3):141-57. full text
Adams V, Lucet IS, Lyras D, Rood JI. DNA binding properties of TnpX indicate that different synapses are formed in the excision and integration of the Tn4451 family. Mol Microbiol. 2004 Aug;53(4):1195-1207. abstract
Ahn HJ, Yang JK, Lee BI, Yoon HJ, Kim HW, Suh SW. Crystallization and preliminary X-ray crystallographic studies of chorismate synthase from Helicobacter pylori. Acta Crystallogr D Biol Crystallogr. 2003 Mar;59(Pt 3):569-71. abstract
Albers SV, Driessen AJM. Analysis of ATPases of putative secretion operons in the thermoacidophilic archaeon Sulfolobus solfataricus. Microbiology 2005; 151:763-773. abstract
Albers SV, Szabó Z, Driessen AJM. Archaeal homolog of bacterial type IV prepilin signal peptidases with broad substrate specificity. J Bacteriol. 2003 Jul; 185:3918–3925. full text
Alexeyev MF, Roberts RA, Daugherty RM, Audia JP, Winkler HH. Cysteine-scanning mutagenesis and thiol modification of the Rickettsia prowazekii ATP/ADP translocase: evidence that transmembrane regions I and II, but not III, are structural components of the aqueous translocation channel. Biochemistry. 2004 Jun 8;43(22):6995-7002. abstract
Alexeyev MF, Winkler HH. Complete replacement of basic amino acid residues with cysteines in Rickettsia prowazekii ATP/ADP translocase. Biochim Biophys Acta – Biomembranes. 2002 Sep 20; 1565(1):136-142. abstract
Allen MD, Buckle AM, Cordell SC, Löwe J, Bycroft M. The crystal structure of AF1521 a protein from Archaeoglobus fulgidus with homology to the non-histone domain of macroH2A. J Mol Biol. 2003 Jul; 330(3):503-511. abstract
Alonso-Casajús N, Morán-Zorzano MT, Viale A M, Muñoz FJ, Eidallyn G, Baroja-Fernández E, Pozueta-Romero J. The role of glycogen phosphorylase in regulating glycogen breakdown and maltodextrin biosynthesis in Escherichia coli. (Communication). XX Congreso de la Sociedad Española de Microbiología, Cácerès, September 19-22 2005. abstract
Anand SP, Rajeswari H, Gupta P, Srinivasan R, Indi S, Ajitkumar P. A C-terminal deletion mutant of Mycobacterium tuberculosis FtsZ shows fast polymerization in vitro. Microbiology. 2004 May; 150(5):1119-1121. full text
Andrade SL, Dickmanns A, Ficner R, Einsle O. Expression, purification and crystallization of the ammonium transporter Amt-1 from Archaeoglobus fulgidus. Acta Cryst. (2005). F61, 861-863. abstract
Andraos N, Tabor S, Richardson CC. The highly processive DNA polymerase of bacteriophage T5. J. Biol. Chem., 2004 Nov; 279(48):50609-50618. full text
Anilkumar G , Srinivasan R, Ajitkumar P. Genomic organization and in vivo characterization of proteolytic activity of FtsH of Mycobacterium smegmatis SN2. Microbiology 2004; 150:2629-2639. abstract
Arechaga I, Butler PJ, Walker JE. Self-assembly of ATP synthase subunit c rings. FEBS Lett. 2002 Mar 27;515(1-3):189-93. abstract
Arechaga I, Miroux B, Karrasch S, Huijbregts R, de Kruijff B, Runswick MJ, Walker JE. Characterisation of new intracellular membranes in Escherichia coli accompanying large scale over-production of the b subunit of F(1)F(o) ATP synthase. FEBS Lett. 2000 Oct 6; 482(3):215-219. full text
Arechaga I, Miroux B, Runswick MJ, Walker JE. Over-expression of Escherichia coli F1F0-ATPase subunit a is inhibited by instability of the uncB gene transcript. FEBS Lett. 2003 Jul 17; 547(1-3):97-100. full text
Banci L, Bertini I, Ciurli S, Dikiy A, Dittmer J, Rosato A, Sciara G, Thompsett AR. NMR solution structure, backbone mobility, and homology modeling of c-type cytochromes from gram-positive bacteria. Chembiochem. 2002 Apr 2;3(4):299-310. full text
Barker PD, Bertini I, Del Conte R, Ferguson SJ, Hajieva P, Tomlinson E, Turano P, Viezzoli MS A further clue to understanding the mobility of mitochondrial yeast cytochrome c: a (15)N T1rho investigation of the oxidized and reduced species. Eur J Biochem. 2001 Aug;268(16):4468-76. full text
Barrera FN, Poveda JA, Gonzalez-Ros JM, Neira JL. Binding of the C-terminal sterile alpha motif (SAM) domain of human p73 to lipid membranes. J Biol Chem. 2003 Nov;278(47):46878-46885. full text
Bateman A, Bycroft M. The structure of a LysM domain from E. coli membrane-bound lytic murein transglycosylase D (MltD). J Mol Biol. 2000 Jun 16; 299(4):1113-1119. abstract
Begum RR, Newbold RJ, Whitford D. Purification of the membrane binding domain of cytochrome b5 by immobilised nickel chelate chromatography. J Chromatogr B Biomed Sci Appl. 2000 Jan 14; 737(1-2):119-130. abstract
Belogurov GA, Lahti R. A lysine substitute for K+. A460K mutation eliminates K+ dependence in H+-pyrophosphatase of Carboxydothermus hydrogenoformans. J Biol Chem. 2002 Dec; 277(51):49651-4. full text
Belogurov GA, Malinen AM, Turkina MV, Jalonen U, Rytkönen K, Baykov AA, Lahti R. Membrane-bound pyrophosphatase of Thermotoga maritima requires sodium for activity. Biochemistry 2005; 44 (6), 2088 -2096. abstract
Belogurov GA, Turkina MV, Penttinen A, Huopalahti S, Baykov AA, Lahti R. H+-pyrophosphatase of Rhodospirillum rubrum. High yield expression in Escherichia coli and identification of the Cys residues responsible for inactivation my mersalyl. J Biol Chem. 2002 Jun 21; 277(25):22209-22214. full text
Bernard R, El Ghachi M, Mengin-Lecreulx D, Chippaux M, Denizot F. BcrC from Bacillus subtilis acts as an undecaprenyl pyrophosphate phosphatase in bacitracin resistance. J Biol Chem. 2005 Aug 12;280(32):28852-7 abstract
Berthold DA, Stenmark P, Nordlund P. Screening for functional expression and overexpression of a family of diiron-containing interfacial membrane proteins using the univector recombination system. Protein Sci 2003; 12:124-134. full text
Berthold DA, Voevodskaya N, Stenmark P, Graslund A, Nordlund P. EPR studies of the mitochondrial alternative oxidase. Evidence for a diiron carboxylate center. J Biol Chem. 2002 Nov 15;277(46):43608-14. full text
Besche H, Tamura N, Tamura T, Zwickl P. Mutational analysis of conserved AAA+ residues in the archeal Lon protease from Thermoplasma aidophilum. FEBS Let. 2004; 574:161-166. full text
Besche H, Zwickl P. The Thermoplasma acidophilum Lon protease has a Ser-Lys dyad active site. Eur.J Biochem 2004; 271:4361-4365. abstract
Best RB, Li B, Steward A, Daggett V, Clarke J Can non-mechanical proteins withstand force? Stretching barnase by atomic force microscopy and molecular dynamics simulation. Biophys J. 2001 Oct; 81(4):2344-2356 full text
Blakey D, Leech A, Thomas GH, Coutts G, Findlay K, Merrick M. Purification of the Escherichia coli ammonium transporter AmtB reveals a trimeric stoichiometry. Biochem J. 2002; 364:527-235. full text
Bolam DN, Xie H, Pell G, Hogg D, Galbraith G, Henrissat B, Gilbert HJ. X4 modules represent a new family of carbohydrate-binding modules that display novel properties. J Biol Chem. 2004 May 28;279(22):22953-63. full text
Bonome J, Gill RT. Amino acid content of recombinant proteins influences the metabolic burden response. Biotech Bioengin.2005; 90 (1):116-126
Borges-Walmsley MI, Beauchamp J, Kelly SM, Jumel K, Candlish D, Harding SE, Price NC, Walmsley AR. Identification of oligomerization and drug-binding domains of the membrane fusion protein EmrA. J Bacteriol Chem. 2003. 278:12903-12912. full text
Borges-Walmsley MI, Du D, McKeegan KS, Sharples GJ, Walmsley AR. VceR regulates the vceCAB drug efflux pump operon of Vibrio cholerae by alternating between mutually exclusive conformations that bind either drugs or promoter DNA. J Mol Biol, In Press, Uncorrected Proof, Available online 2 April 2005.
Bossing T, Brand AH. Dephrin, a transmembrane ephrin with a unique structure, prevents interneuronal axons from exiting the Drosophila embryonic CNS. Development 2002; 129:4205-4218. full text
Bouckaert J, Berglund,J, Schembri M, De Genst E, Cools L, Wuhrer M, Hung CS, Pinkner J, Slättegård R, Zavialov A, Choudhury D, Langermann S, Hultgren Receptor binding studies disclose a novel class of high-affinity inhibitors of the Escherichia coli FimH adhesion. Mol Microbiol. 2005; 55(2):441. full text
Bouhss A, Crouvoisier M, Blanot D, Mengin-Lecreulx D. Purification and characterization of the bacterial MraY translocase catalyzing the first membrane step of peptidoglycan biosynthesis. J. Biol. Chem. 2004 Jul; 279(29):29974-29980. full text
Bourhis JM, Receveur-Brechot V, Oglesbee M, Zhang X, Buccellato M, Darbon H, Canard B, Finet S, Longhi S. The intrinsically disordered C-terminal domain of the measles virus nucleoprotein interacts with the C-terminal domain of the phosphoprotein via two distinct sites and remains predominantly unfolded. Protein Sci. 2005 Aug;14(8):1975-92. abstract
Bravo J, Karathanassis D, Pacold CM, Pacold ME, Ellson CD, et al. The crystal structure of the PX domain from p40(phox) bound to phosphatidylinositol 3-phosphate. Mol Cell. 2001 Oct;8(4):829-39. full text
Broutin I, Benabdelhak H, Moreel X, Lascombe MB, Lerouge D, Ducruix A. Expression, purification, crystallization and preliminary X-ray studies of the outer membrane efflux proteins OprM and OprN from Pseudomonas aeruginosa Acta Cryst. (2005); F61:315-318. abstract
Brown AK, Sridharan S, Kremer L, Lindenberg S, Dover LG, Sacchettini JC, Besra GS. Probing the mechanism of the Mycobacterium tuberculosis beta -ketoacyl-ACP synthase III mtFabH: Factors influencing catalysis and substrate specificity. J Biol Chem. 2005 Jul 22. full text
Buchberger A, Howard MJ, Freund SM, Proctor M, Butler PJ, Fersht AR, Bycroft M. Biophysical characterization of elongin C from Saccharomyces cerevisiae. Biochemistry. 2000 Sep; 39(36):11137-11146 abstract
Bycroft M, Bateman A, Clarke J, Hamill SJ, Sandford R, Thomas RL, Chothia C. The structure of a PKD domain from polycystin-1: implications for polycystic kidney disease. EMBO J. 1999 Jan 15; 18(2):297-305. full text
Cabezon E, Butler PJ, Runswick MJ, Walker JE. Modulation of the oligomerization state of the bovine F1-ATPase inhibitor protein, IF1, by pH. J Biol Chem. 2000 Aug; 275(33):25460-25464 full text
Caldovic L, Morizono H, Panglao MG, Lopez GY, Shi D, Summar ML, Tuchman M. Late onset N-acetylglutamate synthase deficiency caused by hypomorphic alleles. Hum Mutat. 2005 Mar;25(3):293-8. abstract
Campanacci V, Egloff MP, Longhi S, Ferron F, Rancurel C, Salomoni A, Durousseau C, Tocque F, Bremond N, Dobbe JC, Snijder EJ, Canard B, Cambillau C. Structural genomics of the SARS coronavirus: cloning, expression, crystallization and preliminary crystallographic study of the Nsp9 protein. Acta Crystallogr D Biol Crystallogr. 2003 Sep;59(Pt 9):1628-31. full text
Cannon KS, Or E, Clemons WM Jr, Shibata Y, Rapoport TA. Disulfide bridge formation between SecY and a translocating polypeptide localizes the translocation pore to the center of SecY. J Cell Biol. 2005 Apr 25;169(2):219-25. full text
Carbajo RJ, Kellas FA, Runswick MJ, Montgomery MG, Walker JE, Neuhaus D. Structure of the F(1)-binding domain of the stator of bovine F(1)F(o)-ATPase and how it binds an alpha-subunit. J Mol Biol. 2005 Aug;351(4):824-838. abstract
Carbajo RJ, Silvester JA, Runswick MJ, Walker JE, Neuhaus D. Solution structure of subunit F(6) from the peripheral stalk region of ATP synthase from bovine heart mitochondria. J Mol Biol. 2004 Sep;342(2):593-603 abstract
Carrion-Vasquez M, Oberhauser AF, Fowler SB, Marszalek PE, Broedel SE, Clarke J, Fernandez JM. Mechanical and chemical unfolding of a single protein: A comparison. Proc Natl Acad Sci U S A. 1999 Mar; 96:3694-699. full text
Chami M, Steinfels E, Orelle C, Jault JM, Di Pietro A, Rigaud JL, Marco S. Three-dimensional structure by cryo-electron microscopy of YvcC, an homodimeric ATP-binding cassette transporter from Bacillus subtilis. J Mol Biol. 2002 Feb 1;315(5):1075-85. abstract
Champreda V, Khumthong R, Subsin B, Angsuthanasombat C, Panyim S, Katzenmeier G. The two-component protease NS2B-NS3 of dengue virus type 2: Cloning, expression in Escherichia coli and purification of the NS2B, NS3(pro) and NS2B-NS3 proteins. J Biochem Mol Biol 2000; 33 (4) , 294-299. full text
Chan HYE., Brogna S, O'Kane CJ. Dribble, the Drosophila KRR1p homologue, is involved in rRNA processing. Mol Biol Cell 2001; 12:1409-1419. full text
Chan YH, Cheng CHK, Chan KM. Recombinant goldfish growth hormones (gfGH-I and -II) expressed in Escherichia coli have similar biological activities. Comp Biochem Physiol - Part A. Mol Integr Physiol. 2003 Aug;135(4):613-624. abstract
Chaney M, Grande R, Wigneshweraraj SR, Cannon W, Casaz P, Gallegos MT, Schumacher J, Jones S, Elderkin S, Dago AE, Moretti E, Buck M. Binding of transcriptional activators to sigma 54 in the presence of the transition state analog ADP-aluminium fluoride: insights into activator mechanochemical action. Gen Develop 2001; 15:2282-2294. full text
Chanprapaph S, Saparpakorn P, Sangma C, Niyomrattanakit P, Hannongbua S, Angsuthanasombat C, Katzenmeier G Competitive inhibition of the dengue virus NS3 serine protease by synthetic peptides representing polyprotein cleavage sites. Biochem Biophys Res Commun. 2005 May;330(4):1237-46 abstract
Chapin-Rodriguez A, Stock D. Crystal structure of reverse gyrase: insights into the positive supercoiling of DNA. EMBO J. 2002; 21:418-426. full text
Chatellier J, Hill F, Lund PA, Fersht AR. In vivo activities of GroEL minichaperones. Proc Natl Acad Sci U S A. 1998 Aug 18; 95(17): 9861–9866. full text
Chen YW, Allen MD, Veprintsev DB, Lowe J, Bycroft M. The structure of the AXH domain of spinocerebellar ataxin-1. J Biol Chem. 2004 Jan; 279(5):3758-3765. full text
Cheng D, Kelley RW, Cawley GF, Backes WL. High-level expression of recombinant rabbit cytochrome P450 2E1 in Escherichia coli C41 and its purification. Protein Expr Purif. 2004 Jan; 33(1):66-71. abstract
Cheung CP, Yu S, Wong KB, Chan LW, Lai FM, Wang X, Suetsugi M, Chen S, Chan FL. Expression and functional study of estrogen receptor-related receptors in human prostatic cells and tissues. J Clin Endocrinol Metab. 2005 Mar;90(3):1830-44. abstract
Cheung JK, Dupuy B, Deveson DS, Rood JI. The spatial organization of the ViR boxes is critical for ViR-mediated expression of the perfringolysin O gene, pfoA, from Clostridium perfringens. J Bacteriol. 2004; 186:3321-3330. full text
Cheung YY, Allen MD, Bycroft M, Wong KB. Crystallization and preliminary crystallographic analysis of an acylphosphatase from the hyperthermophilic archaeon Pyrococcus horikoshii. Acta Crystallogr D Biol Crystallogr. 2004 Jul;60(Pt 7):1308-10. abstract
Christ D, Winter G. Identification of functional similarities between proteins using directed evolution. Proc Natl Acad Sci U S A. 2003 Nov; 100:13202–13206. full text
Clabecq A, Henry JP, Darchen F. Biochemical characterization of Rab3-GTPase-activating protein reveals a mechanism similar to that of Ras-GAP. J Biol Chem. 2000 Oct 13; 275(41):31786-31791. full text
Claret L, Calder SR., Higgins M, Hughes C. Oligomerization and activation of the FliI ATPase central to bacterial flagellum assembly. Mol Microbiol 2003; 48:1349-1355. full text
Clarke TA, Im SC, Bidwai A, Waskell L. The role of the length and sequence of the linker domain of cytochrome b5 in stimulating cytochrome P450 2B4 catalysis. J. Biol. Chem.2004 Aug; 279(35):36809-36818. full text
Clayton GM, Peak-Chew SY, Evans RM, Schwabe JW. The structure of the ultraspiracle ligand-binding domain reveals a nuclear receptor locked in an inactive conformation. Proc Natl Acad Sci U S A. 2001 Feb 13;98(4):1549-54. full text
Cohen HM, Tawfik DS, Griffiths AD. Promiscuous methylation of non-canonical DNA sites by HaeIII methyltransferase. Nucleic Acids Res 2002. 30:3880-3885. full text
Collinson I, Breyton C, Duong F, Tziatzios C, Schubert D, Or E, Rapoport T, Kühlbrandt W. Projection structure and oligomeric properties of a bacterial core protein translocase. EMBO J. 2001; 20(10):2462-2471. full text
Cordell SC, Löwe J. Crystal structure of the bacterial cell division regulator MinD. FEBS Lett. 2001 ; 492 :160-165 full text
Cordell SC, Robinson EJ, Löwe J. Crystal structure of the SOS cell division inhibitor SulA and in complex with FtsZ. Proc Natl Acad Sci U S A. 2003 Jun 24;100(13):7889-94. full text
Cordell SC; Anderson RE, Löwe J. Crystal structure of the bacterial cell division inhibitor MinC. EMBO J. 2001; 20:2454-2461. full text
Cota E, Steward A, Fowler SB, Clarke J. The folding nucleus of a fibronectin type III domain is composed of core residues of the immunoglobulin-like fold. J Mol Biol. 2001 Feb 2; 305(5):1185-1194. abstract
Crago AM, Koronakis V (1998). Salmonella InvG forms a ring-like multimer that requires the InvH lipoprotein for outer membrane localization. Mol Microbiol. 1998 Oct; 30(1):47-56. full text
Crago AM, Koronakis V (1999). Binding of extracellular matrix laminin to Escherichia coli expressing the Salmonella outer membrane proteins Rck and PagC. FEMS Microbiol Lett. 1999 Jul 15; 176(2):495-501. abstract
Czabotar PE, Martin SR, Hay AJ. Studies of structural changes in the M2 proton channel of influenza A virus by tryptophan fluorescence, Virus Res.2004 Jan; 99(1):57-61. abstract
Dahinden P, Auchli Y, Granjon T, Taralczak M, Wild M, Dimroth P. Oxaloacetate decarboxylase of Vibrio cholerae: purification, characterization, and expression of the genes in Escherichia coli. Arch Microbiol. 2005 Feb;183(2):121-129. full text
Dahinden P, Pos KM, Taralczak M, Dimroth P. Oxaloacetate decarboxylase of Archaeoglobus fulgidus: cloning of genes and expression in Escherichia coli. Arch Microbiol. 2004 Nov;182(5):414-420. abstract
Dalmas O, Orelle C, Foucher AE, Geourjon C, Crouzy S, Di Pietro A, Jault JM. The Q-loop disengages from the first intracellular loop during the catalytic cycle of the multidrug ABC transporter BmrA. J Biol Chem. 2005 Aug 17. full text
DAmelio N, Bonvin AM, Czisch M, Barker P, Kaptein R. The C terminus of apocytochrome b562 undergoes fast motions and slow exchange among ordered conformations resembling the folded state. Biochemistry. 2002 Apr 30;41(17):5505-14. abstract
Daubner SC, Fitzpatrick PF. Site-directed mutants of charged residues in the active site of tyrosine hydroxylase. Biochemistry. 1999 Apr 6; 38(14):4448-4454. abstract
Daugherty RM, Linka N, Audia JP, Urbany C, Neuhaus HE, WinklerHH. The nucleotide transporter of Caedibacter caryophilus exhibits an extended substrate spectrum compared to the analogous ATP/ADP translocase of Rickettsia prowazekii. J Bacteriol 2004 May; 186:3262-3265. full text
De Marco V, Stier G, Blandin S, de Marco A. The solubility and stability of recombinant proteins are increased by their fusion to NusA. Biochem Biophys Res Commun. 2004 Sep 24;322(3):766-71. abstract
den Blaauwen T, Lindqvist A, Löwe J, Nanninga N. Distribution of the Escherichia coli structural maintenance of chromosomes (SMC)-like protein MukB in the cell. Mol Microbiol. 2001 Dec;42(5):1179-88. full text
Depping R, Lohaus C, Meyer HE, Ruger W. The mono-ADP-ribosyltransferases Alt and ModB of bacteriophage T4: Target proteins identified. Biochem Biophys Res Commun. 2005 Aug 18 abstract
Dewa T, Yamada T, Ogawa M, Sugimoto M, Mizuno T, Yoshida K, Nakao Y, Kondo M, Iida K, Yamashita K, Tanaka T, Nango M. Design and expression of cysteine-bearing hydrophobic polypeptides and their self-assembling properties with bacteriochlorophyll a derivatives as a mimic of bacterial photosynthetic antenna complexes. Effect of steric confinement and orientation of the polypeptides on the pigment/polypeptide assembly process. Biochemistry 2005 Apr ;44(13):5129-39. abstract
Dormand EL, Brand AH. Runt determines cell fates in the Drosophila embryonic CNS. Development 1998; 125:1659-1667. full text
Drory O, Frolow F, Nelson N. Crystal structure of yeast V-ATPase subunit C reveals its stator function. EMBO Rep. 2004 Dec;5(12):1148-52. full text
DSilva PD, Schilke B, Walter W, Andrew A, Craig EA. J protein cochaperone of the mitochondrial inner membrane required for protein import into the mitochondrial matrix. Proc Natl Acad Sci U S A. 2003 Nov 25; 100(24):13829-13844. full text
Dumon-Seignovert L, Cariot G, Vuillard L. The toxicity of recombinant proteins in Escherichia coli: a comparison of overexpression in BL21(DE3), C41(DE3), and C43(DE3). Prot Expr Purif. 2004 Sep; 37(1):203-206. abstract
Dutkiewicz R, Schilke B, Cheng S, Knieszner H, Craig EA, Marszalek J. Sequence-specific interaction between mitochondrial Fe-S scaffold protein Isu and Hsp70 Ssq1 is essential for their in vivo function. J Biol Chem. 2004 Jul; 279(28):29167-29174. full text
Ekblad CM, Chavali GB, Basu BP, Freund SM, Veprintsev D, Hughes-Davies L, Kouzarides T, Doherty AJ, Itzhaki LS. Binding of EMSY to HP1beta: implications for recruitment of HP1beta and BS69. EMBO Rep. 2005 Jul;6(7):675-80. abstract
Ekblad CM, Friedler A, Veprintsev D, Weinberg RL, Itzhaki LS. Comparison of BRCT domains of BRCA1 and 53BP1: A biophysical analysis Protein Sci. 2004 Mar;13(3):617-25. full text
El Ghachi M, Bouhss A, Blanot D, Mengin-Lecreulx D. The bacA gene of Escherichia coli encodes an undecaprenyl pyrophosphate phosphatase activity. J Biol Chem. 2004 Jul 16;279(29):30106-13. full text
Eng NF, Szeto J, Acharya S, Tessier D, Dillon JA. The C-terminus of MinE from Neisseria gonorrhoeae acts as a topological specificity factor by modulating MinD activity in bacterial cell division. Research in Microbiology, In Press, Uncorrected Proof, Available online 19 October 2005.
Eshaghi S, Hedrén M, Ignatushchenko Abdel Nasser M, Hammarberg T, Thornell A, Nordlund P. An efficient strategy for high-throughput expression screening of recombinant integral membrane proteins. Protein Science 2005; 14:676-683. abstract
Esue O, Cordero M, Wirtz D, Tseng Y. The assembly of MreB, a prokaryotic homolog of actin. J Biol Chem. 2005 Jan 28;280(4):2628-35. full text
Evans L, Clarkson J, Yudkin MD, Errington J, Feucht A. Analysis of the Interaction between the Transcription Factor sG and the Anti-Sigma Factor SpoIIAB of Bacillus subtilis. J Bacteriol. 2003 Aug; 185: 4615–4619. full text
Fernandez-Ballester G, Maya J, Martin A, Parche S, Gomez J, Titgemeyer F, Neira JL. The histidine-phosphocarrier protein of Streptomyces coelicolor folds by a partially folded species at low pH. Eur J Biochem. 2003 May;270(10):2254-2267. full text
Feucht A, Abbotts L, Errington J. The cell differentiation protein SpoIIE contains a regulatory site that controls its phosphatase activity in response to asymmetric septation. Mol Microbiol. 2002 Aug;45(4):1119-30. full text
Feucht A, Lucet I, Yudkin MD, Errington J. Cytological and biochemical characterization of the FtsA cell division protein of Bacillus subtilis. Mol Microbiol. 2001 Apr; 40(1):115-125. full text
Francia MV, Zabala JC, de la Cruz F, Garcia Lobo JM. The IntI1 integron integrase preferentially binds single-stranded DNA of the attC site. J Bacteriol. 1999 Nov; 181(21):6844-6849. full text
Frankel P, Aronheim A, Kavanagh E, Balda MS, Matter K, Bunney TD, Marshall CJ. RalA interacts with ZONAB in a cell density-dependent manner and regulates its transcriptional activity. EMBO J. 2005 Jan 12;24(1):54-62. full text
Fromme JC, Verdine GL. Structure of a trapped endonuclease III-DNA covalent intermediate. EMBO J. 2003 Jul; 22(13):3461-3471. full text
George RR, Harris R, Nunn CM, Cramer R, Djordjevic S. Chaperonin assisted overexpression, purification, and characterisation of human PP2A methyltransferase. Protein Expr Purif. 2002 Nov ; 26(2):266-274. abstract
Gil A, Gutiérrez LM, Carrasco-Serrano C, Alonso MT, Viniegra S, Criado M. Modifications in the C terminus of the synaptosome-associated protein of 25 kDa (SNAP-25) and in the complementary region of synaptobrevin affect the final steps of exocytosis. J Biol Chem. 2002 Mar 22;277(12):9904-10. full text
Gong XM, Choi J, Franzin CM, Zhai D, Reed JC, Marassi FM. Conformation of membrane-associated proapoptotic tBid. J Biol Chem. 2004 Jul;279(28):28954-60. full text
Gonzalez B, Schell MJ, Letcher AJ, Veprintsev DB, Irvine RF, Williams RL Structure of a human inositol 1,4,5-trisphosphate 3-kinase: substrate binding reveals why it is not a phosphoinositide 3-kinase. Mol Cell. 2004 Sep 10;15(5):689-701. full text
Gordon-Smith DJ, Carbajo RJ, Yang JC, Videler H, Runswick MJ, Walker JE, Neuhaus D. Solution structure of a C-terminal coiled-coil domain from bovine IF(1): the inhibitor protein of F(1) ATPase. J Mol Biol. 2001 Apr 27;308(2):325-39. abstract
Guasch A, Lucas M, Moncalián G, Cabezas M, Pérez-Luque R, Gomis-Rüth FX, de la Cruz F, Coll M. Recognition and processing of the origin of transfer DNA by conjugative relaxase TrwC. Nat Struct Biol. 2003; 10:1002-1010. full text
Gupta P, Anand SP, Srinivasan R, Rajeswari H, Indi S, Ajitkumar P. The C-terminally truncated MtFtsZ-?C169 mutant of Mycobacterium tuberculosis FtsZ shows GTPase and GTP-induced, GTP-specific polymerization activities in vitro. Microbiology 2004; 150:3906-3908. full text
Haering CH , Löwe J, Hochwagen A, Nasmyth K. Molecular architecture of SMC proteins and the yeast cohesin complex. Mol Cell 2002 Apr; 9(4):773-788. abstract
Hagting A, Jackman M, Simpson K, Pines J. Translocation of cyclin B1 to the nucleus at prophase requires a phosphorylation-dependent nuclear import signal. Curr Biol. 1999 Jul 1;9(13):680-9. full text
Haguenauer A, Raimbault S, Masscheleyn S, Gonzalez-Barroso Mdel M, Criscuolo F, Plamondon J, Miroux B, Ricquier D, Richard D, Bouillaud F, Pecqueur C. A new renal mitochondrial carrier, KMCP1, is up-regulated during tubular cell regeneration and induction of antioxidant enzymes. J Biol Chem. 2005 Jun 10;280(23):22036-43. full text
Hamill SJ, Steward A, Clarke J. The folding of an immunoglobulin-like Greek key protein is defined by a common-core nucleus and regions constrained by topology. J. Mol. Biol.2000; 297(1): 165-178 abstract
Hansen CH, Du L, Naur P, Olsen CE, Axelsen KB, Hick AJ, Pickett JA, Halkier BA. CYP83b1 is the oxime-metabolizing enzyme in the glucosinolate pathway in Arabidopsis. J Biol Chem. 2001 Jul 6; 276(27):24790-24796. full text
Hansen CH, Wittstock U, Olsen CE, Hick AJ, Pickett JA, Halkier BA. Cytochrome p450 CYP79F1 from Arabidopsis catalyzes the conversion of dihomomethionine and trihomomethionine to the corresponding aldoximes in the biosynthesis of aliphatic glucosinolates. J Biol Chem. 2001 Apr 6; 276(14):11078-11085. full text
Harper JA, Stuart JA, Jekabsons MB, Roussel D, Brindle KM, Dickinson K, Jones RB, Brand MD. Artifactual uncoupling by uncoupling protein 3 in yeast mitochondria at the concentrations found in mouse and rat skeletal-muscle mitochondria. Biochem J. 2002 Jan 1;361(Pt 1):49-56. full text
Heeb S, Kuehne SA, Bycroft M, Crivii S, Allen MD, Haas D, Camara M, Williams P Functional analysis of the post-transcriptional regulator RsmA reveals a novel RNA-binding site. Journal of Molecular Biology, J Mol Biol. 2006 Feb 3;355(5):1026-36. abstract
Herter T, Berezina OV, Zinin NV, Velikodvorskaya GA, Greiner R, Borriss R. Glucose-1-phosphatase (AgpE) from Enterobacter cloacae displays enhanced phytase activity. Appl Microbiol Biotechnol. 2005 Sep 28;:1-5. abstract
Hicks DB,Wang ZX, Wei Y, Kent R, Guffanti AA, Banciu H, Bechhofer DH, Krulwich TA. A tenth atp gene and the conserved atpI gene of a Bacillus atp operon have a role in Mg2+ uptake. Proc Natl Acad Sci U S A. 2003 Sep; 100: 10213–10218. full text
Hormaeche I, Alkorta I, Moro F, Valpuesta JM, Goni FM, De La Cruz F. Purification and properties of TrwB, a hexameric, ATP-binding integral membrane protein essential for R388 plasmid conjugation. J Biol Chem. 2002 Nov; 277(48):46456-62. full text
Hormaeche I, Iloro I, Arrondo JL, Goñi FM, de la Cruz F, Alkorta I. Role of the transmembrane domain in the stability of TrwB, an integral protein involved in bacterial conjugation. J Biol Chem. 2004 Mar; 279(12):10955-61. full text
Horn C, Bremer E, Schmitt L. Functional overexpression and in vitro re-association of OpuA, an osmotically regulated ABC-transport complex from Bacillus subtilis. FEBS Lett. 2005 Oct 6. full text
Howell SC, Mesleh MF, Opella SJ. NMR structure determination of a membrane protein with two transmembrane helices in micelles: MerF of the bacterial mercury detoxification system. Biochemistry. 2005 Apr 5;44(13):5196-206. abstract
Huang H, Scherman MS, DHaeze W, Vereecke D, Holsters M, Crick DC, McNeil MR. Identification and active expression of the Mycobacterium tuberculosis gene encoding 5-phospho-{alpha}-d-ribose-1-diphosphate: decaprenyl-phosphate 5-phosphoribosyltransferase, the first enzyme committed to decaprenylphosphoryl-d-arabinose synthesis. J Biol Chem. 2005 Jul 1;280(26):24539-43. abstract
Hui KM, Orriss GL, Schirmer T, Magnadottir B, Schifferli JA, Inal JM. Expression of functional recombinant von Willebrand factor-A domain from human complement C2: a potential binding site for C4 and CRIT. Biochem J. 2005 Aug 1;389(Pt 3):863-8. full text
Hölzl G, Leipelt M, Ott C, Zahringer U, Lindner B, Warnecke D, Heinz E. Processive lipid galactosyl/glucosyltransferases from Agrobacterium tumefaciens and Mesorhizobium loti display multiple specificities. Glycobiology. 2005 Sep;15(9):874-86. abstract
Ip DT, Chan SH, Allen MD, Bycroft M, Wan DC, Wong KB. Crystallization and preliminary crystallographic analysis of a novel orange fluorescent protein from the Cnidaria tube anemone Cerianthus sp. Acta Crystallogr D Biol Crystallogr. 2004 Feb;60(Pt 2):340-1. abstract
Isaacson RL, Weeds AG, Fersht AR. Equilibria and kinetics of folding of gelsolin domain 2 and mutants involved in familial amyloidosis–Finnish type. Proc Natl Acad Sci U S A. 1999 Sep 28; 96(20): 11247–11252. full text
Ito M, Hicks DB, Henkin TM, Guffanti AA, Powers BD, Zvi L, Uematsu K, Krulwich TA. MotPS is the stator-force generator for motility of alkaliphilic Bacillus, and its homologue is a second functional Mot in Bacillus subtilis. Mol Microbiol. 2004 Aug;53(4):1035-1049. abstract
Jeudy S, Coutard B, Lebrun R, Abergel C. Acanthamoeba polyphaga mimivirus NDK: preliminary crystallographic analysis of the first viral nucleoside diphosphate kinase. Acta Cryst. (2005). F61, 569-572 abstract
Jez JM, Cahoon RE. Kinetic mechanism of glutathione synthetase from Arabidopsis thaliana. J Biol Chem. 2004 Oct 8;279(41):42726-31. full text
Johansson K, Bourhis JM, Campanacci V, Cambillau C, Canard B, Longhi S. Crystal structure of the measles virus phosphoprotein domain responsible for the induced folding of the C-terminal domain of the nucleoprotein. J Biol Chem. 2003 Nov 7;278(45):44567-73 full text
Jönsson TJ, Murray MS, Johnson LC, Poole LB, Lowther WT. Structural basis for the retroreduction of inactivated peroxiredoxins by human sulfiredoxin. Biochemistry. 2005 Jun 21;44(24):8634-42. full text
Kadiyala V, Nadeau LJ, Spain JC. Construction of Escherichia coli strains for conversion of nitroacetophenones to ortho-aminophenols. Appl Environ Microbiol. 2003 Nov; 69: 6520–6526. full text
Kerbarh O, Ciulli A, Howard NI, Abell C. Salicylate biosynthesis: overexpression, purification, and characterization of Irp9, a bifunctional salicylate synthase from Yersinia enterocolitica. J Bacteriol. 2005 Aug;187(15):5061-6. abstract
Khan S, Pierce D, Vale RD. Interactions of the chemotaxis signal protein CheY with bacterial flagellar motors visualized by evanescent wave microscopy. Curr Biol. 2000; 10:927-930. full text
Kim HL, Yoon HJ, Ha JY, Lee BI, Lee HH, Mikami B, Suh SW. Crystallization and preliminary X-ray crystallographic analysis of nicotinic acid mononucleotide adenylyltransferase from Pseudomonas aeruginosa. Acta Crystallogr D Biol Crystallogr. 2004 May;60(Pt 5):948-9. abstract
Kim JK, Mulrooney SB, Hausinger RP. Biosynthesis of active Bacillus subtilis urease in the absence of known urease accessory proteins. J Bacteriol. 2005 Oct;187(20):7150-4. abstract
Kim MK, Kim YS, Rho SH, Im YJ, Lee JH, Kang GB, Eom SH. Crystallization and preliminary X-ray crystallographic analysis of quinolinate phosphoribosyltransferase of Helicobacter pylori. Acta Crystallogr D Biol Crystallogr. 2003 Jul; 59(Pt 7):1265-1266. full text
Kim MK, Song HE, Kim YS, Rho SH, Im YJ, Lee JH, Kang GB, Eom SH. Crystallization and preliminary X-ray crystallographic analysis of orotate phopshoribosyltransferase from Helicobacter pylori. Mol Cells 2003; 15(3):361-363. full text
Kim YA, Park TJ, Park JM. Expression and Purification of MC4R/TM2 peptide. 11th Asian Chemical Congress, Poster, Seoul, Aug 24-26, 2005. abstract
Kissinger CR, Rejto PA, Pelletier LA, Thomson JA, et al. Crystal structure of Human ABABD/HSD10 with a bound inhibitor: implications for design of Alzheimer's disease therapeutics. J Mol Biol 2004; 342:943-952. abstract
Kitaoka S, Wada K, Hasegawa Y, Minami Y, Fukuyama K, Takahashi Y. Crystal structure of Escherichia coli SufC, an ABC-type ATPase component of the SUF iron–sulfur cluster assembly machinery. FEBS Lett. 2006 Jan 9;580(1):137-43. abstract
Ko TK, Kelly E, Pines J. CrkRS: a novel conserved Cdc2-related protein kinase that colocalises with SC35 speckles. J Cell Sci. 2001 Jul;114(Pt 14):2591-603. full text
Kocan M. Regulation of the phosphate starvation response in Corynebacterium glutamicum by the PhoRS two-component system Inaugural Dissertation, Düsseldorf 2005, page 46. full text
Kong EH, Heldring N, Gustafsson JA, Treuter E, Hubbard RE, Pike AC. Delineation of a unique protein-protein interaction site on the surface of the estrogen receptor. Proc Natl Acad Sci U S A. 2005 Mar 8;102(10):3593-8. full text
Korepanova A, Gao FP, Hua Y, Qin H, Robert K. Nakamoto RK, Cross TA. Cloning and expression of multiple integral membrane proteins from Mycobacterium tuberculosis in Escherichia coli. Protein Science (2005); 14:148-158. abstract
Kovermann P, Truscott KN, Guiard B, Rehling P, Sepuri NB, Muller H, Jensen RE, Wagner R, Pfanner N. Tim22, the essential core of the mitochondrial protein insertion complex, forms a voltage-activated and signal-gated channel. Mol Cell 2002 Feb; 9(2):363-373. abstract
Kremer L, Dover LG, Carrere S, Nampoothiri KM, Lesjean S, Brown AK, Brennan PJ, Minnikin DE, Locht C, Besra GS. Mycolic acid biosynthesis and enzymic characterization of the beta-ketoacyl-ACP synthase A-condensing enzyme from Mycobacterium tuberculosis. Biochem J. 2002 Jun 1;364(Pt 2):423-430 full text
Kremer L, Dover LG, Morbidoni HR, Vilcheze C, Maughan WN, Baulard A, Tu SC, Honore N, Deretic V, Sacchettini JC, Locht C, Jacobs WR Jr, Besra GS. Inhibition of InhA activity, but not KasA activity, induces formation of a KasA-containing complex in mycobacteria. J Biol Chem. 2003 Jun;278(23):20547-54. full text
Kremer L, Maughan WN, Wilson RA, Dover LG, Besra GS. The M. tuberculosis antigen 85 complex and mycolyltransferase activity. Lett Appl Microbiol. 2002;34(4):233-7. full text
Kremer L, Nampoothiri KM, Lesjean S, Dover LG, Graham S, Betts J, Brennan PJ, Minnikin DE, Locht C, Besra GS. Biochemical characterization of acyl carrier protein (AcpM) and malonyl-CoA:AcpM transacylase (mtFabD), two major components of Mycobacterium tuberculosis fatty acid synthase II. J Biol Chem. 2001 Jul 27; 276(30):27967-27974. full text
Krueger-Koplin RD, Sorgen PL, Krueger-Koplin ST, Rivera-Torres IA, Cahill SM, Hicks DB, Grinius L, Krulwich TA, Girvin ME. An evaluation of detergents for NMR structural studies of membrane proteins. J Biomol NMR. 2004; 17:43-57. abstract
Kurisu G, Zakharov SD, Zhalnina MV, Bano S, Eroukova VY, Rokitskaya TI, Antonenko YN, Wiener MC, Cramer WA. The structure of BtuB with bound colicin E3 R-domain implies a translocon. Nat Struct Biol. 2003 Nov;10(11):948-54. full text
Kwak JE, Ha KS, Lee JY, Im YJ, Park SH, Eom SH, Suh SW. Crystallization and preliminary X-ray crystallographic analysis of the surE protein from Thermotoga maritima. Acta Crystallogr D Biol Crystallogr. 2001 Apr;57(Pt 4):612-3. full text
Kwon AR, Lee BI, Han BW, Ahn HJ, Yang JK, Yoon HJ, Suh SW. Crystallization and preliminary X-ray crystallographic analysis of aspartate 1-decarboxylase from Helicobacter pylori. Acta Crystallogr D Biol Crystallogr. 2002 May;58(Pt 5):861-3. abstract
Kästner CN, Dimroth P, Pos KM. The Na+-dependent citrate carrier of Klebsiella pneumoniae: high-level expression and site-directed mutagenesis of asparagine-185 and glutamate-194. Arch Microbiol. 2000 Jul-Aug; 174(1-2):67-73. abstract
Kästner CN, Prummer M, Sick B, Renn A, Wild UP, Dimroth P. The citrate carrier CitS probed by single-molecule fluorescence spectroscopy. Biophysical Journal 2003; 84:1651-1659. full text
Laage R, Langosch D. Strategies for prokaryotic expression of eukaryotic membrane proteins. Traffic 2001; 2:99-104. full text
Lambert O, Benabdelhak H, Chami M, Jouan L, Nouaille E, Ducruix A, Brisson L. Trimeric structure of OprN and OprM efflux proteins from Pseudomonas aeruginosa, by 2D electron crystallography. J Struct Biol. 2005; 150:50-57. abstract
Lecoq K, Konrad M, Daignan-Fornier B. Yeast GMP kinase mutants constitutively express AMP biosynthesis genes by phenocopying a hypoxanthine-guanine phosphoribosyltransferase defect. Genetics 2000 Nov; 156:953-961. full text
Lee BI, Chang C, Cho SJ, Han GW, Yu YG, Eom SH, Suh SW. Lactate dehydrogenase from the hyperthermophilic archaeon Methanococcus jannaschii: overexpression, crystallization and preliminary X-ray analysis. Acta Crystallogr D Biol Crystallogr. 2000 Jan;56 ( Pt 1):81-3. abstract
Lee BI, Lee JY, Moon J, Han BW, Suh SW. Crystallization and preliminary X-ray crystallographic analysis of UDP-N-acetylglucosamine acyltransferase from Helicobacter pylori. Acta Crystallogr D Biol Crystallogr. 2002 May;58(Pt 5):864-6. abstract
Lee CL, Petersen NO. The lateral diffusion of selectively aggregated peptides in giant unilamellar vesicles. Biophys J. 2003;84:1756-1764. full text
Lee JA, Ahn HJ, Ha JY, Shim SM, Kim KH, Kim HK, Suh SW. Crystallization and preliminary X-ray crystallographic analysis of a putative agmatinase from Deinococcus radiodurans. Acta Crystallogr D Biol Crystallogr. 2004 Oct;60(Pt 10):1890-2. abstract
Lee JH, Im YJ, Rho SH, Park SH, Kim MK, Cho SJ, Kim TY, Oh JH, Shin HJ, Lee DS, Eom SH. Crystallization and preliminary X-ray analysis of class II fructose-1,6-bisphosphate aldolase from Thermus caldophilus. Protein Pept Lett. 2003 Oct;10(5):511-5. abstract
Lee JY, Kwak JE, Moon J, Eom SH, Liong EC, Pedelacq JD, Berendzen J, Suh SW. Crystal structure and functional analysis of the SurE protein identify a novel phosphatase family. Nat Struct Biol. 2001 Sep;8(9):789-94. full text
Legros F, Malka F, Frachon P, Lombes A, Rojo M. Organization and dynamics of human mitochondrial DNA. J Cell Sci. 2004 Jun; 117(13):2653-2662. full text
Leonard TA, Butler PJ, Löwe J. (2004) Structural analysis of the chromosome segregation protein Spo0J from Thermus thermophilus. Mol Microbiol. 2004 Jul;53(2):419-32. abstract
Leonard TA, Butler PJ, Löwe J. (2005) Bacterial chromosome segregation: structure and DNA binding of the Soj dimer--a conserved biological switch. EMBO J. 2005 Jan 26;24(2):270-82. full text
Liu M, Turner RJ, Winstone TL, Saetre A, Dyllick-Brenzinger M, Jickling G, Tari LW, Weiner JH, Taylor DE. Escherichia coli TehB requires S-adenosylmethionine as a cofactor to mediate tellurite resistance. J Bacteriol 2000 Nov; 182(22):6509-6513. full text
Lloyd AJ, Brandish PE, Gilbey AM, Bugg TDH. Phospho-N-acetyl-muramyl-pentapeptide translocase from Escherichia coli : catalytic role of conserved aspartic acid residues. J Bacteriol 2004 Mar; 186:1747:1757. full text
Low HH, Moncrieffe MC, Löwe J. The crystal structure of ZapA and its modulation of FtsZ polymerisation. J Mol Biol. 2004; 341:839-852. abstract
Lu CL, Stricker J, Erickson HP. Site-specific mutations of FtsZ - effects on GTPase and in vitro assembly. BMC Microbiol. 2001; 1: 7. full text
Lucet I, Borriss R, Yudkin MD. Purification, kinetic properties, and intracellular concentration of SpoIIE, an integral membrane protein that regulates sporulation in Bacillus subtilis. J Bacteriol. 1999 May; 181(10):3242-3245. full text
Lucet I, Feucht A, Yudkin MD, Errington J. Direct interaction between the cell division protein FtsZ and the cell differentiation protein SpoIIE. EMBO J. 2000 Apr 3;19(7):1467-75. full text
Lucet IS, Tynan FE, Adams V, Rossjohn J, Lyras D, Rood JI. Identification of the structural and functional domains of the large serine recombinase TnpX from Clostridium perfringens. J Biol Chem. 2005 Jan;280(4):2503-2511.
Luo C, Krishnasamy R, Basu AK, Zou Y. Recognition and incision of site-specifically modified C8 guanine adducts formed by 2-aminofluorene, N-acetyl-2-aminofluorene and 1-nitropyrene by UvrABC nuclease. Nucleic Acids Res. 2000 Oct; 28(19): 3719–3724. full text
Lyras D, Adams V, Lucet I, Rood JI. The large resolvase TnpX is the only transposon-encoded protein required for transposition of the Tn4451/3 family of integrative mobilizable elements. Mol Microbiol. 2004 Mar;51(6):1787-1800. abstract
Löwe J, Amos LA. Crystal structure of the bacterial cell-division protein FtsZ. Nature. 1998 Jan 8; 391:203-206. full text
Löwe J, Cordell SC, van den Ent F. Crystal structure of the SMC head domain: an ABC ATPase with 900 residues antiparallel coiled-coil inserted. J Mol Biol. 2001 Feb 9; 306(1):25-35. abstract
Löwe J. Crystal structure determination of FtsZ from Methanococcus jannaschii. J Struct Biol. 1998 Dec15; 124(2-3):235-243. abstract
Ma H, Penning TM. Conversion of mammalian 3alpha-hydroxysteroid dehydrogenase to 20alpha-hydroxysteroid dehydrogenase using loop chimeras: changing specificity from androgens to progestins. Proc Natl Acad Sci U S A. 1999 Sep 28;96(20):11161-6. full text
Malinen AM, Belogurov GA, Salminen M, Baykov AA, Lahti R. Elucidating the role of conserved glutamates in H+-pyrophosphatase of Rhodospirillum rubrum. J Biol Chem. 2004 Jun 25; 279(26):26811-6. full text
Mallam AL, Jackson SE. Folding studies on a knotted protein. J Mol Biol. 2005 Mar 11;346(5):1409-21. full text
Marheineke K, Krude T. Nucleosome assembly activity and intracellular localization of human CAF-1 changes during the cell division cycle. J Biol Chem. 1998 Jun 12; 273(24):15279-15286. full text
Masi M, Pages JM, Pradel E. Overexpression and purification of the three components of the Enterobacter aerogenes AcrA-AcrB-TolC multidrug efflux pump. J Chromatogr B Analyt Technol Biomed Life Sci. 2003 Mar 25; 786(1-2):197-205. abstract
Maxwell KL, Wildes D, Zarrine-Afsar A, et al. Protein folding: defining a "standard" set of experimental conditions and a preliminary kinetic data set of two-state proteins. Protein Sci. 2005 Mar;14(3):602-16. full text
Mayor U, Johnson CM, Daggett V, Fersht AR. Protein folding and unfolding in microseconds to nanoseconds by experiment and simulation. Proc Natl Acad Sci U S A. 2000 Dec 5; 97(25): 13518–13522. full text
McGowan S, Lucet IS, Cheung JK, Awad MM, Whisstock JC, Rood JI. The FxRxHrS Motif: A Conserved Region Essential for DNA Binding of the VirR Response Regulator from Clostridium perfringens. J Mol Biol. 2002 Oct 4; 322(5):997-1011. abstract
McLaughlin SH, Jackson SE. Folding and stability of the ligand-binding domain of the glucocorticoid receptor. Protein Sci 2002; 11:1926-1936. full text
Mikkelsen MD, Hansen CH, Wittstock U, Halkier BA. Cytochrome P450 CYP79B2 from Arabidopsis catalyzes the conversion of tryptophan to indole-3-acetaldoxime, a precursor of indole glucosinolates and indole-3-acetic acid. J Biol Chem. 2000 Oct 27; 275(43):33712-33717. full text
Miroux B, Walker JE. Over-production of proteins in Escherichia coli: mutant hosts that allow synthesis of some membrane proteins and globular proteins at high levels. J Mol Biol. 1996 Jul 19; 260(3):289-298. abstract
Mogensen JE, Tapadar D, Schmidt MA, Otzen DE. Barriers to folding of the transmembrane domain of the Escherichia coli autotransporter adhesin involved in diffuse adherence. Biochemistry 2005 Mar; 44(11):4533-4545. abstract
Mohanty AK, Wiener MC. Membrane protein expression and production: effects of polyhistidine tag length and position. Protein Exp Purif. 2004 Feb; 33(2):311-325. abstract
Mokhonov V, Mokhonova E, Yoshihara E, Masui R, Sakai M, Akama H, Nakae T. Multidrug transporter MexB of Pseudomonas aeruginosa: overexpression, purification, and initial structural characterization. Protein Exp. Purif. 2005; 40(1):91-100. abstract
Mokhonova EI, Mokhonov VV, Akama H, Nakae T. Forceful large-scale expression of "problematic" membrane proteins. Biochim Biophys Res Comm. 2005; 327:650-655. abstract
Montigny C, Penin F, Lethias C, Falson P. Overcoming the toxicity of membrane peptide expression in bacteria by upstream insertion of Asp-Pro sequence. Biochim Biophys Acta – Biomembranes. 2004 Jan 28; 1660(1-2):53-65. abstract
Mukhopadhyay B, Concar EM, Wolfe RS. A GTP-dependent vertebrate-type phosphoenolpyruvate carboxykinase from Mycobacterium smegmatis. J Biol Chem. 2001 May 11; 276(19):16137-16145. full text
Mulrooney SB, Hausinger RP. Metal ion dependence of recombinant Escherichia coli allantoinase. J Bacteriol. 2003 Jan; 185(1): 126–134. full text
Mulrooney SB, Meinhardt DR, Waskell L. The a-helical membrane spanning domain of cytochrome b5 interacts with cytochrome P450 via non-specific interactions. Biochim Biophys Acta 2004; 1674:319-326. abstract
Mulrooney SB, Ward SK, Hausinger RP. Purification and properties of the Klebsiella aerogenes UreE metal-binding domain, a functional metallochaperone of urease. J Bacteriol. 2005 May;187(10):3581-3585 abstract
Mulrooney SB, Waskell L. High-level expression in Escherichia coli and purification of the membrane-bound form of cytochrome b(5). Protein Expr Purif. 2000 Jun; 19(1):173-178. abstract
Murakami K, Yumoto F, Ohki S, Yasunaga T, Tanokura M, Wakabayashi T. Structural basis for Ca2+-regulated muscle relaxation at interaction sites of troponin with actin and tropomyosin. J Mol Biol 2005 Sept 9; 352(1):178-201 abstract
Möhlmann T, Tjaden J, Schwoppe C, Winkler HH, Kampfenkel K, Neuhaus HE. Occurrence of two plastidic ATP/ADP transporters in Arabidopsis thaliana L.--molecular characterisation and comparative structural analysis of similar ATP/ADP translocators from plastids and Rickettsia prowazekii. Eur J Biochem. 1998 Mar 15; 252(3):353-359. full text
Naur P, Hansen CH, Bak S, Hansen BG, Jensen NB, Nielsen HL, Halkier BA. CYP79B1 from Sinapis alba converts tryptophan to indole-3-acetaldoxime. Arch Biochem Biophys. 2003 Jan 1; 409(1):235-241. abstract
Niyomrattanakit P, Winoyanuwattikun P, Chanprapaph S, Angsuthanasombat C, Panyim S, Katzenmeier G. Identification of residues in the dengue virus type 2 NS2B cofactor that are critical for NS3 protease activation. J Virol. 2004 Dec; 78(24):13708-13716 full text
Nunn CM, Jeeves M, Cliff MJ, Urquhart GT, George RR, Chao LH, Tscuchia Y, Djordjevic S. Crystal structure of tobacco etch virus protease shows the protein C terminus bound within the active site. J Mol Biol. 2005 Jul 1;350(1):145-55 abstract
Oates J, Barrett CML, Barnett JP, Byrne KG, Bolhuis A, Robinson C. The Escherichia coli twin-arginine translocation apparatus incorporates a distinct form of TatABC complex, spectrum of modular TatA complexes and minor TatAB complex. J. Mol Biol 2005; 346:295-305. abstract
Oh YK, Moon J, Lee JY, Cho SW, Shin W, Suh SW. Overexpression, crystallization and preliminary X-ray crystallographic analysis of dihydrofolate reductase. Acta Crystall 2000; D56:775-777. abstract
Oliynyk Z, Briseno-Roa L, Janowitz T, Sondergeld P, Fersht AR. Designing a metal-binding site in the scaffold of Escherichia coli KDO8PS. Protein Eng Des Sel. 2004 Apr; 17(4):383-390. full text
Ollagnier-de-Choudens S, Mattioli T, Takahashi Y, Fontecave M. Iron-sulfur cluster assembly: characterization of IscA and evidence for a specific and functional complex with ferredoxin. J Biol Chem. 2001 Jun 22;276(25):22604-7 full text
Oresnik IJ, Ladner CL, Turner RJ. Identification of a twin-arginine leader-binding protein. Mol Microbiol. 2001 Apr;40(2):323-331 full text
Orriss GL, Runswick MJ, Collinson IR, Miroux B, Fearnley IM, Skehel JM, Walker JE. The delta- and epsilon-subunits of bovine F1-ATPase interact to form a heterodimeric subcomplex. Biochem J. 1996 Mar 1;314 (Pt 2):695-700. full text
Oubridge C, Kuglstatter A, Jovine L, Nagai K. Crystal structure of SRP19 in complex with the S domain of SRP RNA and its implication for the assembly of the signal recognition particle. Mol Cell. 2002 Jun; 9(6):1251-1261. full text
O'Brien PJ, Ellenberger T. Human alkyladenine DNA glycosylase uses acid-base catalysis for selective excision of damaged purines. Biochemistry. 2003 Oct 2;42(42):12418-29. abstract
Palmieri L, Palmieri F, Runswick MJ, Walker JE. Identification by bacterial expression and functional reconstitution of the yeast genomic sequence encoding the mitochondrial dicarboxylate carrier protein. FEBS Lett. 1996 Dec 16;399(3):299-302. abstract
Panic B, Perisic O, Veprintsev DB, Williams RL, Munro S. Structural basis for Arl1-dependent targeting of homodimeric GRIP domains to the Golgi apparatus. Mol Cell. 2003 Oct;12(4):863-74. full text
Parfenyev AN, Salminen A, Halonen P, Hachimori A, Baykov AA, Lahti R. Quaternary structure and metal ion requirement of family II pyrophosphatases from Bacillus subtilis, Streptococcus gordonii, and Streptococcus mutans. J Biol Chem. 2001 Jul 6; 276(27):24511-24518. full text
Park SH, Im YJ, Rho SH, Lee JH, Yang S, Kim E, Eom SH. Crystallization and preliminary X-ray crystallographic studies of the sixth PDZ domain of glutamate-receptor interacting protein 1 (GRIP1) from Rattus norvegicus. Acta Crystallogr D Biol Crystallogr. 2002 Jun;58(Pt 6 Pt 2):1063-5. full text
Pecqueur C, Alves-Guerra MC, Gelly C, Levi-Meyrueis C, Couplan E, Collins S, Ricquier D, Bouillaud F, Miroux B. Uncoupling protein 2, in vivo distribution, induction upon oxidative stress, and evidence for translational regulation. J Biol Chem. 2001 Mar 23; 276(12):8705-8712. full text
Peng R, Gallwitz D. Sly1 protein bound to Golgi syntaxin Sed5p allows assembly and contributes to specificity of SNARE fusion complexes. J Cell Biol. 2002 May 13;157(4):645-55. full text
Piešiniene L, Truncaite L, Zajanckauskaite A, Nivinskas R. The sequences and activities of RegB endoribonucleses of T4-related bacteriophages. Nucleic Acids Res. 2004; 32: 5582-5595. full text
Porcelli I, de Leeuw E, Wallis R, van den Brink-van der Laan E,| de Kruijff B, Wallace BA, PalmerT, Bercks BC. Characterization and membrane assembly of the TatA component of the Escherichia coli twin-arginine protein transport system. Biochemistry 2002; 41:13690-13697. full text
Pos KM, Diederichs K. Purification, crystallization and preliminary diffraction studies of AcrB, an inner-membrane multi-drug efflux protein. Acta Cryst. 2002; D58:1865-1867. full text
Pos KM, Schiefner A, Seeger MA, Diederichs K. Crystallographic analysis of AcrB. FEBS Lett. 2004 Apr 30;564(3):333-9. full text
Prisic S, Xu M, Wilderman PR, Peters RJ. Rice contains two disparate ent-copalyl diphosphate synthases with distinct metabolic functions. Plant Physiol. 2004 Dec;136(4):4228-36. full text
Pružinská A, Tanner G, Anders I, Roca M, Hörtensteiner S. Chlorophyll breakdown: Pheophorbide a oxygenase is a Rieske-type iron–sulfur protein, encoded by the accelerated cell death 1 gene. Proc Natl Acad Sci U S A. 2003; 100: 15259–15264. full text
Purdy MD, Wiener MC. Expression, purification, and initial structural characterization of YadQ, a bacterial homolog of mammalian ClC chloride channel proteins. FEBS Lett. 2000 Jan 21; 466(1):26-28. abstract
Quick M, Wright EM. Employing Escherichia coli to functionally express, purify, and characterize a human transporter. Proc Natl Acad Sci U S A. 2002 June 25; 99(13): 8597–8601. full text
Rahaman A, Srinivasan N, Shamala N, Shaila MS. The fusion core complex of the peste des petits ruminants virus is a six-helix bundle assembly. Biochemistry 2003; 42:922-931. abstract
Rajalingam K, Wunder C, Brinkmann V, Churin Y, Hekman M, Sievers C, Rapp UR, Rudel T. Prohibitin is required for Ras-induced Raf–MEK–ERK activation and epithelial cell migration. Nat Cell Biol. 2005 Aug;7(8):837-43. full text
Ramirez-Arcos S, Liao M, Marthaler S, Rigden M, Dillon JA. Enterococcus faecalis divIVA: an essential gene involved in cell division, cell growth and chromosome segregation. Microbiology. 2005 May;151(Pt 5):1381-93. abstract
Ramirez-Arcos S, Szeto J, Beveridge TJ, Victor C, Francis F, Dillion JAR. Deletion of the cell-division inhibitor MinC results in lysis of Neisseria gonorrhoeae. Microbiology 2001; 147:225-237. full text
Ramirez-Arcos S, Szeto J, Dillon JA, Margolin W. Conservation of dynamic localization among MinD and MinE orthologues: oscillation of Neisseria gonorrhoeae proteins in Escherichia coli. Mol Microbiol. 2002 Oct;46(2):493-504. abstract
Rinaldi FC, Guimarães BG. Cloning, expression, purification, crystallization and preliminary X-ray diffraction analysis of the oxidoreductases DsbA from Xylella fastidiosa and Xanthomonas axonopodis. XIV Reunião Anual de Usuários do LNLS. Livro de Resumos. Page 24. Unicamp, Brazil, 2004. abstract
Rivera-Torres IO, Krueger-Koplin RD, Hicks DB, Cahill SM, Krulwich TA, Girvin ME. pKa of the essential Glu54 and backbone conformation for subunit c from the H+ -coupled F1F0 ATP synthase from an alkaliphilic Bacillus. FEBS Lett. 2004; 575:131-135. full text
Rogl H, Kosemund K, Kuhlbrandt W, Collinson I. Refolding of Escherichia coli produced membrane protein inclusion bodies immobilised by nickel chelating chromatography. FEBS Lett. 1998 Jul 31; 432(1-2):21-26. abstract
Rojo M, Legros F, Chateau D, Lombès A. Membrane topology and mitochondrial targeting of mitofusins, ubiquitous mammalian homologs of the transmembrane GTPase Fzo. J Cell Sci 2002. 115:1663-1674. full text
Rottensteiner H, Kramer A, Lorenzen S, Stein K, Landgraf C, Volkmer-Engert R, Erdmann R. Peroxisomal membrane proteins contain common Pex19p-binding sites that are an integral part of their targeting signals. Mol Biol Cell. 2004 Jul;15(7):3406-17. full text
Röthlisberger D, Pos KM, Plückthun A. An antibody library for stabilizing and crystallizing membrane proteins – selecting binders to the citrate carrier CitS. FEBS Lett. 2004; 564:340-348. full text
Sadanandom A, Poghosyan Z, Fairbairn DJ, Murphy DJ Differential regulation of plastidial and cytosolic isoforms of peptide methionine sulfoxide reductase in Arabidopsis. Plant Physiol. 2000 May;123(1):255-64. full text
Sajidan A, Farouk A, Greiner R, Jungblut P, Müller EC, Borriss R. Molecular and physiological characterisation of a 3-phytase from soil bacterium Klebsiella sp. ASR1. Appl Microbiol Biotechnol 2004 ; 65:110-118. abstract
Santiveri CM, Pérez-Cañadillas JM, Vadivelu MK, Allen MD, Rutherford TJ, Watkins NA, Bycroft M. NMR structure of the alpha-hemoglobin stabilizing protein: insights into conformational heterogeneity and binding. : J Biol Chem. 2004 Aug;279(33):34963-70. full text
Saribas AS, Gruenke L, Waskell L. Overexpression and purification of the membrane-bound cytochrome P450 2B4. Protein Expr Purif. 2001 Mar; 21(2):303-309. abstract
Sattler SE, Cahoon EB, Coughlan SJ, DellaPenna D. Characterization of tocopherol cyclases from higher plants and cyanobacteria. Evolutionary implications for tocopherol synthesis and function. Plant Physiol. 2003 Aug; 132: 2184–2195. full text
Savage DF, Egea PF, Robles-Colmenares Y, O Connell III JD, Stroud RM. Architecture and Selectivity in Aquaporins: 2.5 Å X-Ray Structure of Aquaporin Z. PLoS Biol. 2003 Dec; 1: 334-340. full text
Schell-Steven A, Stein K, Amoros M, Landgraf C, Volkmer-Engert R, Rottensteiner H, Erdmann R. Identification of a novel, intraperoxisomal pex14-binding site in pex13: association of pex13 with the docking complex is essential for peroxisomal matrix protein import. Mol Cell Biol. 2005 Apr;25(8):3007-18. full text
Schimmele B, Grafe N, Pluckthun A Ribosome display of mammalian receptor domains. Protein Eng Des Sel. 2005 Jun;18(6):285-94. abstract
Schlieper D, Oliva MA, Andreu JM, Löwe J. Structure of bacterial tubulin BtubA/B: evidence for horizontal gene transfer. Proc Natl Acad Sci U S A. 2005 Jun 28;102(26):9170-5. full text
Schmitzberger F, Kilkenny ML, Lobley CM, Webb ME, Vinkovic M, Matak-Vinkovic D, Witty M, Chirgadze DY, Smith AG, Abell C, Blundell TL. Structural constraints on protein self-processing in L-aspartate-alpha-decarboxylase. EMBO J. 2003 Dec 1;22(23):6193-204. abstract
Schon O, Friedler A, Bycroft M, Freund SMV, Fersht AR. Molecular Mechanism of the Interaction between MDM2 and p53. J Mol Biol. 2002 Oct 25; 323(3):491-501. abstract
Schroeter R, Schlisio S, Lucet I, Yudkin M, Borriss R. The Bacillus subtilis regulator protein SpoIIE shares functional and structural similarities with eukaryotic protein phosphatases 2C. FEMS Microbiol Lett. 1999 May 1; 174(1):117-123. abstract
Schuldt AJ, Adams JHJ, Davidson CM, Micklem DR, Haseloff J, St Johnston D, Brand AH. Miranda mediates asymmetric protein and RNA localization in the developing nervous system. Genes Dev.1998. 12:1847–1857. full text
Schultz A, Baltscheffsky M (2003). Properties of mutated Rhodospirillum rubrum H(+)-pyrophosphatase expressed in Escherichia coli. Biochim Biophys Acta. 2003 Dec 8; 1607(2-3):141-151. abstract
Schultz A, Baltscheffsky M (2004). Inhibition studies on Rhodospirillum rubrum H+-pyrophosphatase expressed in Escherichia coli. Biochem Biophys Acta – Bioenergetics. 2004; 1656 (2-3):156-165. abstract
Scott KA, Batey S, Hooton KA, Clarke J. The folding of spectrin domains I: Wild-type domains have the same stability but very different kinetic properties. J Mol Biol 2004; 344:195-205. abstract
Scott KA, Steward A, Fowler SB, Clarke J. Titin; a multidomain protein that behaves as the sum of its parts. J Mol Biol. 2002 Jan 25; 315(4):819-829. abstract
Searls T, Chen X, Allen S, Yudkin MD. Evaluation of the kinetic properties of the sporulation protein SpoIIE of Bacillus subtilis by inclusion in a model membrane. J Bacteriol. 2004 May;186(10):3195-201. full text
Serek J, Bauer-Manz G, Struhalla G, van den Berg L, Kiefer D, Dalbey R, Kuhn A. Escherichia coli YidC is a membrane insertase for Sec-independent proteins. EMBO J. 2004 Jan 28;23(2):294-301. full text
Shammas C, Menne TF, Hilcenko C, Michell SR, Goyenechea B, Boocock GR, Durie PR, Rommens JM, Warren AJ. Structural and mutational analysis of the SBDS protein family. Insight into the leukemia-associated Shwachman-Diamond Syndrome. J Biol Chem. 2005 May 13;280(19):19221-9. abstract
Shanklin J. Overexpression and purification of the Escherichia coli inner membrane enzyme acyl-acyl carrier protein synthase in an active form. Protein Expr Purif. 2000 Apr; 18(3):355-360. Erratum in: Protein Expr Purif 2000 Jul;19(2):319. abstract
Shaw AZ, Miroux B. A general approach for heterologous membrane protein expression in Escherichia coli: the uncoupling protein, UCP1, as an example. Methods Mol Biol. 2003;228:23-35
Shenoy AR, Srinivasan N, Subramaniam M, Visweswariah SS. Mutational analysis of the Mycobacterium tuberculosis Rv1625c adenylyl cyclase: residues that confer nucleotide specificity contribute to dimerization. FEBS Letters 2003 Jun 19; 545(2-3):253-259. abstract
Smith VR, Walker JE. Purification and folding of recombinant bovine oxoglutarate/malate carrier by immobilized metal-ion affinity chromatography. Protein Expr Purif. 2003 Jun; 29(2):209-216. abstract
Soane L, Fiskum G. TAT-mediated endocytotic delivery of the loop deletion Bcl-2 protein protects neuron against cell death. J Neurochem. 2005 Oct;95(1):230-43. abstract
Soelaiman S, Jakes K, Wu N, Li CM, Shoham M. Crystal structure of colicin E3: Implications for cell entry and ribosome inactivation. Mol Cell 2001 Nov 21; 8(5):1053-1062. abstract
Song HK, Lee JY, Lee MG, Moon J, Min K, Yang JK, Suh SW. Insights into eukaryotic multistep phosphorelay signal transduction revealed by the crystal structure of Ypd1p from Saccharomyces cerevisiae. J Mol Biol. 1999 Nov 5;293(4):753-61 full text
Souleyre EJ, Greenwood DR, Friel EN, Karunairetnam S, Newcomb RD. An alcohol acyl transferase from apple (cv. Royal Gala), MpAAT1, produces esters involved in apple fruit flavour. FEBS J. 2005 Jun;272(12):3132-44. abstract
Starai VJ, Escalante-Semerena JC. Identification of the protein acetyltransferanse (Pat) enzyme that acetylates acetyl-CoA synthetase in Salmonella enteritica. J Mol Biol 2004; 340:1005-1012. abstract
Steckelbroeck S, Jin Y, Oyesanmi B, Kloosterboer HJ, Penning TM. Tibolone is metabolized by the 3alpha/3beta-hydroxysteroid dehydrogenase activities of the four human isozymes of the aldo-keto reductase 1C subfamily: inversion of stereospecificity with a delta5(10)-3-ketosteroid. Mol Pharmacol. 2004 Dec;66(6):1702-11. full text
Stein K, Schell-Steven A, Erdmann R, Rottensteiner H. Interactions of Pex7p and Pex18p/Pex21p with the peroxisomal docking machinery: implications for the first steps in PTS2 protein import. Mol Cell Biol. 2002 Sep;22(17):6056-69. full text
Steinfels E, Orelle C, Dalmas O, Penin F, Miroux B, Di Pietro A, Jault JM. Highly efficient over-production in E. coli of YvcC, a multidrug-like ATP-binding cassette transporter from Bacillus subtilis. Biochim Biophys Acta. 2002 Sep 20; 1565(1):1-5. abstract
Steward A, Toca-Herrera JL, Clarke J. Versatile cloning system for construction of multimeric proteins for use in atomic force microscopy. Protein Sci. 2002 Sep;11(9):2179-2183. full text
Stoeber K, Mills AD, Kubota Y, Krude T, Romanowski P, Marheineke K, Laskey RA, Williams GH. Cdc6 protein causes premature entry into S phase in a mammalian cell-free system. EMBO J. 1998 Dec 15; 17(24):7219-7229. full text
Stuart JA, Harper JA, Brindle KM, Jekabsons MB, Brand MD (1). A mitochondrial uncoupling artifact can be caused by expression of uncoupling protein 1 in yeast. Biochem J. 2001 Jun 15;356(Pt 3):779-89. full text
Stuart JA, Harper JA, Brindle KM, Jekabsons MB, Brand MD. (2) Physiological levels of mammalian uncoupling protein 2 do not uncouple yeast mitochondria. J Biol Chem. 2001 May 25;276(21):18633-9. full text
Studholme DJ, Wigneshwereraraj SR, Gallegos MT, Buck M. Functionality of purified sN (s54 ) and a NifA-like protein from the hyperthermophile Aquifex aeolicus. J Bacteriol. 2000; 182:1616-1623. full text
Studier FW, Moffatt BA. Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes. J Mol Biol. 1986 May 5; 189(1):113-130.
Sutherland-Smith AJ, Moores CA, Norwood FLM, Hatch V, Craig R, Kendrick-Jones J, Lehman W. An atomic model for actin binding by the CH domains and spectrin-repeat modules of utrophin and dystrophin. J Mol Biol. 2003 May 23; 329(1):15-33. abstract
Szeto J, Acharya S, Eng NF, Dillon JAR. The N terminus of MinD contains determinants which affect its dynamic localization and enzymatic activity. J Bacteriol. 2004 Nov; 186(21): 7175–7185. full text
Szeto J, Eng NF, Acharya S, Rigden MD, Dillon JAR. A conserved polar region in the cell division site determinant MinD required for responding to MinE-induced oscillation but not for localization within coiled arrays. Res Microbiol. 2005; 156:17-29. abstract
Sørensen HP, Mortensen KK (1). Advanced genetic strategies for recombinant protein expression in Escherichia coli. J Biotech. 2005; 115:113-128. abstract
Sørensen HP, Mortensen KK (2). Soluble expression of recombinant proteins in the cytoplasm of Escherichia coli. Micr Cell Fact. 2005; 4:1. full text
Sørensen HP, Sperling-Petersen HU, Mortensen KK (1). Production of recombinant thermostable proteins expressed in Escherichia coli: completion of protein synthesis is the bottleneck. J Chromatogr B Analyt Technol Biomed Life Sci. 2003 Mar 25; 786(1-2):207-214. abstract
Sørensen HP, Sperling-Petersen HU, Mortensen KK (2). A favorable solubility partner for the recombinant expression of streptavidin. Protein Exp Purif. 2003 Dec; 32(2):252-259. abstract
Takahashi Y., Nakamura M. Functional assignment of the ORF2-iscS-iscU-iscA-hscB-hscA-fdx-ORF3 gene cluster involved in the assembly of Fe-S clusters in Escherichia coli. J. Biochem. 1999;126:917-926. abstract
Tato I, Zunzunegui S, de la Cruz F, Cabezon E. TrwB, the coupling protein involved in DNA transport during bacterial conjugation, is a DNA-dependent ATPase. Proc Natl Acad Sci U S A. 2005 Jun 7;102(23):8156-61. full text
Teo H, Perisic O, Gonzalez B, Williams RL. ESCRT-II, an endosome-associated complex required for protein sorting: crystal structure and interactions with ESCRT-III and membranes. Dev Cell. 2004 Oct;7(4):559-69. full text
Teo H, Veprintsev DB, Williams RL. Structural insights into endosomal sorting complex required for transport (ESCRT-I) recognition of ubiquitinated proteins. J Biol Chem. 2004 Jul 2;279(27):28689-96 full text
Testet E, Laroche-Traineau J, Noubhani A, Coulon D, Bunoust O, Camougrand N, Manon S, Lessire R, Bessoule JJ Ypr140wp, "the yeast tafazzin", displays a mitochondrial lysophosphatidylcholine (lyso-PC) acyltransferase activity related to triacylglycerol and mitochondrial lipid synthesis. Biochem J. 2005 May 1;387(Pt 3):617-26 abstract
Thai K, Choi J, Franzin CM, Marassi FM. Bcl-XL as a fusion protein for the high-level expression of membrane-associated proteins. Protein Science 2005, 14:948-955. abstract
Thomas J, Stafford GP, Hughes C. Docking of cytosolic chaperone-substrate complexes at the membrane ATPase during glagellar type III protein export. Proc Natl Acad Sci U S A. 2004; 101:3945-3950. abstract
Tiemann B , Depping R, Gineikiene E, Kaliniene L, Nivinskas R , Rüger W. ModA and ModB, two ADP-ribosyltransferases encoded by bacteriophage T4: Catalytic properties and mutation analysis. J Bacteriol. 2004 Nov; 186(21): 7262–7272. full text
Tjaden J, Schwoppe C, Mohlmann T, Quick PW, Neuhaus HE. Expression of a plastidic ATP/ADP transporter gene in Escherichia coli leads to a functional adenine nucleotide transport system in the bacterial cytoplasmic membrane. J Biol Chem. 1998 Apr 17; 273(16):9630-9636. full text
Trentmann O, Decker C, Winkler HH, Neuhaus HE. Charged amino-acid residues in transmembrane domains of the plastidic ATP/ADP transporter from Arabidopsis are important for transport efficiency, substrate specificity, and counter exchange properties. Eur J Biochem. 2000 Jul;267(13):4098-105 full text
Truscott KH, Kovermann P, Geissler A, Merlin A, Meijer M, Driessen AJM, Rassow J, Pfanner N, Wagner R. A presequence- and voltage-sensitive channel of the mitochondrial preprotein translocase formed by Tim23. Nat Struct Biol 2001 Dec; 8(12):1074 – 1082. abstract
Tse E, Lobato MN, Forster A, Tanaka T, Chung GT, Rabbitts TH. Intracellular antibody capture technology: application to selection of intracellular antibodies recognising the BCR-ABL oncogenic protein. J Mol Biol. 2002 Mar 15; 317(1):85-94. abstract
Urban S, Wolfe MS. Reconstitution of intramembrane proteolysis in vitro reveals that pure rhomboid is sufficient for catalysis and specificity. Proc Natl Acad Sci U S A. 2005 Feb 8;102(6):1883-8. full text
Val DL, Cronan JE Jr. In vivo evidence that S-adenosylmethionine and fatty acid synthesis intermediates are the substrates for the LuxI family of autoinducer synthases. J Bacteriol. 1998 May; 180(10):2644-2651. full text
van den Berg B, Black PN, Clemons WM Jr, Rapoport TA. Crystal structure of the long-chain fatty acid transporter FadL. Science. 2004 Jun 4;304(5676):1506-9. full text
van den Berg B, Clemons WM Jr, Collinson I, Modis Y, Hartmann E, Harrison SC, Rapoport TA. X-ray structure of a protein-conducting channel. Nature. 2004 Jan 1;427(6969):36-44. full text
van den Ent F, Löwe, J (2005). Crystal structure of the ubiquitin-like protein YukD from Bacillus subtilis .FEBS Letters, 2005 Jul; 579(17):3837-3841 abstract
van den Ent F, Amos LA, Löwe J. Prokaryotic origin of the actin cytoskeleton. Nature. 2001 Sep 6;413(6851):39-44. abstract
van den Ent F, Lockhart A, Kendrick-Jones J, Löwe J. Crystal structure of the N-terminal domain of MukB: a protein involved in chromosome partitioning. Structure 1999 Oct 15; 7(10):1181-1187. abstract
van den Ent F, Löwe J (2000). Crystal structure of the cell division protein FtsA from Thermotoga maritima. EMBO J. 2000 Oct ;19(20):5300-7. full text
van Lieshout JF, Verhees CH, Ettema TJ, van der Sar S, Imamura H, Matsuzawa H, van der Oost J, de Vos WM. Identification and molecular characterization of a novel type of a-galactosidase from Pyrococcus furiosus. Biocatal. Biotransform. 2003 Aug; 21(4-5): 243-52. abstract
Van Molle I, Buts L, Coppens F, Qiang L, Wyns L, Loris R, Bouckaert J, De Greve H. Crystallization of the FaeE chaperone of Escherichia coli F4 fimbriae. Acta Cryst. (2005); F61:427-431. abstract
Varcamonti M, Nicastro G, Venema G, Kok J. Proteins of the lactococcin A secretion system: lcnD encodes two in-frame proteins. FEMS Microbiol Lett. 2001 Nov 13; 204(2):259-263. abstract
Verdon G, Albers SV, Dijkstra BW, Driessen AJ, Thunnissen AM. Purification, crystallization and preliminary X-ray diffraction analysis of an archaeal ABC-ATPase. Acta Crystallogr D Biol Crystallogr Feb 2002 ; 58(Pt 2):362-365. abstract
Videira PA, Garcia AP, Sa-Correia I. Functional and topological analysis of the Burkholderia cenocepacia priming glucosyltransferase BceB, involved in the biosynthesis of the cepacian exopolysaccharide. J Bacteriol. 2005 Jul;187(14):5013-8. abstract
Vincentelli R, Bignon C, Gruez A, Canaan S, Sulzenbacher G, Tegoni M, Campanacci V, Cambillau C. Medium-scale structural genomics: Strategies for protein expression and purification. Acc Chem Res. 2003; 36:165-172. full text
Voet-van-Vormizeele J, Groth G. High-level expression of the Arabidopsis thaliana ethylene receptor protein ETR1 in Escherichia coli and purification of the recombinant protein. Prot Expr Purif. 2003 Nov; 32(1):89-94. abstract
Wada K, Hasegawa Y, Gong Z, Minami Y, Fukuyama K, Takahashi Y Crystal structure of Escherichia coli SufA involved in biosynthesis of iron–sulfur clusters: Implications for a functional dimer. FEBS Lett. 2005 Dec 6,579(29):6543-8. abstract
Walian P, Cross TA, Jap BK. Structural genomics of membrane proteins. Genome Biol. 2004;5(4):215. full text
Wang DN, Safferling M, Lemieux MJ, Griffith H, Chen Y, Li XD. Practical aspects of overexpressing bacterial secondary membrane transporters for structural studies. Biochim Biophys Acta – Biomembranes. 2003 Feb 17; 1610(1):23-36. full text
Wang LW, Zhu L, Zhou JM, Rao ZH. Crystallization and preliminary X-ray crystallographic analysis of yeast prion protein Ure2p with shortened N-terminal. Chin Sci Bull. 2001 Jan; 46(1). full text
Wang WK, Proctor MR, Buckle AM, Bycroft M, Chen YW. Crystallization and preliminary crystallographic studies of a SAM domain at the C-terminus of human p73alpha. Acta Crystallogr D Biol Crystallogr. 2000 Jun; 56 (Pt 6):769-71 abstract
Wang X, Lee WM, Watanabe T, Schwartz M, Janda M, Ahlquist P. Brome mosaic virus 1a nucleoside triphosphatase/helicase domain plays crucial roles in recruiting RNA replication templates. J Virol. 2005 Nov;79(21):13747-58. abstract
Wani MA, Zhu Q, El-Mahdy M, Venkatachalam S, Wani AA. Enhanced sensitivity to anti-benzo(a)pyrene-diol-epoxide DNA damage correlates with decreased global genomic repair attributable to abrogated p53 function in human cells. Cancer Res. 2000 Apr 15;60(8):2273-80. full text
Warren AJ, Bravo J, Williams RL, Rabbitts TH. Structural basis for the heterodimeric interaction between the acute leukaemia-associated transcription factors AML1 and CBFß. EMBO J. 2000. 19:3004-3015. full text
Wehrle F, Appoldt Y, Kaim G, Dimroth P. Reconstitution of Fo of the sodium ion translocating ATP synthase of Propionigenium modestum from its heterologously expressed and purified subunits. Eur J Biochem. 2002; 269: 2567-2573. full text
Wehrle F, Kaim G, Dimroth P. Molecular mechanism of the ATP synthase s Fo motor probed by mutational analyses of subunit a. J Mol Biol. 2002 Sep 13; 322(2):369-381. abstract
Weinberg RL, Freund SMV, Veprintsev DB, Bycroft M, Fersht AR. Regulation of DNA binding of p53 by its C-terminal domain. J Mol Biol. 2004 Sep; 342(3):801-811. full text
Weinberg RL, Veprintsev DB, Fersht AR. Cooperative binding of tetrameric p53 to DNA. J Mol Biol. 2004 Aug 27; 341(5):1145-1159. abstract
Whalan RH, Funnal SGP, Bowler LD, Hudson MJ, Robinson A, Dowson CG. PiuA and PiaA, iron uptake lipoproteins of Streptococcus pneumoniae, elicit serotype independent antibody responses following human pneumococcal septicaemia. FEMS Immun Med Microbiol. 2005; 43:73-80. abstract
Wiener MC. A pedestrian guide to membrane protein crystallization. Methods 2004; 34:364-372. full text
Wigneshweraraj SR, Chaney MK, Ishihama A, Buck M. Regulatory sequences in sigma 54 localise near the start of DNA melting. J Mol Biol. 2001 Mar 2; 306(4):681-701. abstract
Wilderman PR, Xu M, Jin Y, Coates RM, Peters RJ. Identification of syn-pimara-7,15-diene synthase reveals functional clustering of terpene synthases involved in rice phytoalexin/allelochemical biosynthesis. Plant Physiology 2004 Aug; 135:2098-2105. full text
Williams GH, Romanowski P, Morris L, Madine M, Mills AD, Stoeber K, Marr J, Laskey RA, Coleman N. Improved cervical smear assessment using antibodies against proteins that regulate DNA replication Proc Natl Acad Sci U S A. 1998 Dec 8; 95(25): 14932–14937. full text
Wilson RA, Maughan WN, Kremer L, Besra GS, Futterer K. The structure of Mycobacterium tuberculosis MPT51 (FbpC1) defines a new family of non-catalytic alpha/beta hydrolases. J Mol Biol 2004 Jan 9;335(2):519-30. abstract
Wilson RA, Rai S, Maughan WN, Kremer L, Kariuki BM, Harris KD, Wagner T, Besra GS, Futterer K. Crystallization and preliminary X-ray diffraction data of Mycobacterium tuberculosis FbpC1 (Rv3803c). Acta Crystallogr D Biol Crystallogr. 2003 Dec;59(Pt 12):2303-5. abstract
Wong KB, DeDecker BS, Freund SM, Proctor MR, Bycroft M, Fersht AR. Hot-spot mutants of p53 core domain evince characteristic local structural changes. Proc Natl Acad Sci U S A. 1999 Jul; 96(15):8438-8442. full text
Wong KB, Lee CF, Chan SH, Leung TY, Chen YW, Bycroft M. Solution structure and thermal stability of ribosomal protein L30e from hyperthermophilic archaeon Thermococcus celer. Protein Sci. 2003 Jul;12(7):1483-1495. full text
Wong KB, Wang WK, Proctor MR, Bycroft M, Chen YW. Crystallization and preliminary crystallographic studies of a ribosomal protein L30e from the hyperthermophilic archaeon Thermococcus celer. Acta Crystallogr D Biol Crystallogr. 2001 Jun;57(Pt 6):865-866 abstract
Woolhead CA, Mant A, Kim SJ, Robinson C, Rodger A. Conformation of a purified "spontaneously" inserting thylakoid membrane protein precursor in aqueous solvent and detergent micelles. J Biol Chem. 2001 May 4; 276(18):14607-14613. full text
Wragg S, Drickamer K. Identification of amino-acid residues that determine pH dependence of ligand binding to the asialoglycoprotein receptor during endocytosis. J Biol Chem. 1999 Dec; 274:35400-35406. full text
Wright H, Barona-Gomez F, Hodgson DA, Fulop V. Expression, purification and preliminary crystallographic analysis of phosphoribosyl isomerase (PriA) from Streptomyces coelicolor. Acta Crystallogr D Biol Crystallogr. 2004 Mar;60(Pt 3):534-6. abstract
Wu AY, Tang XB, Martinez SE, Ikeda K, Beavo JA. Molecular determinants for cyclic nucleotide binding to the regulatory domains of phosphodiesterase 2A. J. Biol. Chem. 2004 Sep; 279(36):37928-37938. full text
Xu M, Hillwig ML, Prisic S, Coates RM, Peters RJ. Functional identification of rice syn-copalyl diphosphate synthase and its role in initiating biosynthesis of diterpenoid phytoalexin/allelopathic natural products. Plant J 2004; 39:309–318. abstract
Xu M, Prisic S, Wilderman PR, Jin Y, Coates RM, Peters RJ Elucidating biosynthesis of the rice allelochemical/phytoalexin momilactone B. Fourth Wolrd Congress on Allelopathy, Wagga Wagga, Australia, Aug 2005. full text
Yang JC, Van Den Ent F, Neuhaus D, Brevier J, Löwe J. Solution structure and domain architecture of the divisome protein FtsN. Mol Microbiol. 2004 May;52(3):651-60. abstract
Yang M, Proctor MR, DN, Errey JC, Field RA, Gilbert HJ, Davis BG. Probing the breadth of macrolide glycosyltransferases: In vitro remodeling of a polyketide antibiotic creates active bacterial uptake and enhances potency. JACS communications June 11, 2005. full text
Yang M, Proctor MR, Bolam DN, Errey JC, Field RA, Gilbert HJ, Davis BG. Probing the breadth of macrolide glycosyltransferases: in vitro remodeling of a polyketide antibiotic creates active bacterial uptake and enhances potency. J Am Chem Soc. 2005 Jul 6;127(26):9336-7. full text
Ye J, van den Berg B. Crystal structure of the bacterial nucleoside transporter Tsx. EMBO J. 2004 Aug 18;23(16):3187-95. full text
Yoon HJ, Kim HL, Lee SK, Kim HW, Kim HW, Lee JY, Mikami B, Suh SW Crystal structure of peptide deformylase from Staphylococcus aureus in complex with actinonin, a naturally occurring antibacterial agent. Proteins. 2004 Nov 15;57(3):639-42. abstract
Yu EW, Aires JR, McDermott G, Nikaido H. A periplasmic drug-binding site of the AcrB multidrug efflux pump: a crystallographic and site-directed mutagenesis study. J Bacteriol. 2005 Oct;187(19):6804-15. abstract
Zarivach R, Ben-Zeev E, Wu N, Auerbach T, Bashan A, Jakes K, Dickman K, Kosmidis A, Schluenzen F, Yonath A, Eisenstein M, Shoham M. On the interaction of colicin E3 with the ribosome. Biochimie 2002 May-Jun; 84(5-6):447-454. full text
Zheng L, Kostrewa D, Berneche S, Winkler FK, Li XD. The mechanism of ammonia transport based on the crystal structure of AmtB of Escherichia coli. Proc Natl Acad Sci U S A. 2004 Dec 7;101(49):17090-5. full text
Zou Y, Ma H, Minko IG, Shell SM, Yang Z, Qu Y, Xu Y, Geacintov NE, Lloyd RS DNA damage recognition of mutated forms of UvrB proteins in nucleotide excision repair. Biochemistry. 2004 Apr 13;43(14):4196-205. Erratum in : Biochemistry. 2004 Jun 1;43(21):6832. full text
Zou Y, Shell SM, Utzat CD, Luo C, Yang Z, Geacintov NE, Basu AK. Effects of DNA adduct structure and sequence context on strand opening of repair intermediates and incision by UvrABC nuclease. Biochemistry. 2003 Nov; 42(43):12654-61. full text
Zúñiga M, Franke-Fayard B, Venema G, Kok J, Nauta A. Characterization of the putative replisome organizer of the lactococcal bacteriophage r1t. J Virol. 2002 Oct; 76(20): 10234–10244. full text